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Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana
Gene families : OG0001988 (Archaeplastida) Phylogenetic Tree(s): OG0001988_tree ,
OG_05_0006894 (LandPlants) Phylogenetic Tree(s): OG_05_0006894_tree ,
OG_06_0008017 (SeedPlants) Phylogenetic Tree(s): OG_06_0008017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01024253001 | |
| Cluster | HCCA: Cluster_158 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00245550 | evm_27.TU.AmTr_v1... | Regulator of nonsense transcripts 1 homolog... | 0.03 | Archaeplastida | |
| AT5G35970 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Archaeplastida | |
| LOC_Os02g47560.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.04 | Archaeplastida | |
| LOC_Os09g04440.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.03 | Archaeplastida | |
| Pp3c5_28660V3.1 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.03 | Archaeplastida | |
| Solyc03g097370.4.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004497 | monooxygenase activity | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |