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  5. AMTR_s00041p00179870

AMTR_s00041p00179870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.144

Description : Dirigent protein 21 OS=Arabidopsis thaliana


Gene families : OG0000064 (Archaeplastida) Phylogenetic Tree(s): OG0000064_tree ,
OG_05_0000024 (LandPlants) Phylogenetic Tree(s): OG_05_0000024_tree ,
OG_06_0000028 (SeedPlants) Phylogenetic Tree(s): OG_06_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00179870
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00175010 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00041p00185100 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00059p00176030 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00134p00105640 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_28538 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g57130.1 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g01660.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_139540g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_42210g0010 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g18490.1 No alias Dirigent protein 4 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Smo139600 No alias Dirigent protein 11 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo402446 No alias No description available 0.02 Archaeplastida
Solyc10g008900.3.1 No alias Dirigent protein 19 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 38 180
No external refs found!