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  5. GSVIVT01024641001

GSVIVT01024641001


Description : Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PBCP phosphatase


Gene families : OG0000759 (Archaeplastida) Phylogenetic Tree(s): OG0000759_tree ,
OG_05_0007359 (LandPlants) Phylogenetic Tree(s): OG_05_0007359_tree ,
OG_06_0006734 (SeedPlants) Phylogenetic Tree(s): OG_06_0006734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024641001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT2G30170 No alias Protein phosphatase 2C family protein 0.13 Archaeplastida
LOC_Os01g07090.1 No alias photosynthetic acclimation PBCP phosphatase 0.06 Archaeplastida
MA_6241493g0010 No alias Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa... 0.03 Archaeplastida
Solyc01g105020.3.1 No alias Probable protein phosphatase 2C 71 OS=Oryza sativa... 0.07 Archaeplastida
Solyc06g007350.4.1 No alias photosynthetic acclimation PBCP phosphatase 0.12 Archaeplastida
Zm00001e016822_P004 No alias photosynthetic acclimation PBCP phosphatase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 134 306
No external refs found!