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  5. GSVIVT01024701001

GSVIVT01024701001


Description : Protein CHUP1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000973 (Archaeplastida) Phylogenetic Tree(s): OG0000973_tree ,
OG_05_0001732 (LandPlants) Phylogenetic Tree(s): OG_05_0001732_tree ,
OG_06_0000962 (SeedPlants) Phylogenetic Tree(s): OG_06_0000962_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024701001
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00127710 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00155p00024540 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G07120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 Archaeplastida
AT3G25690 CHUP1 Hydroxyproline-rich glycoprotein family protein 0.04 Archaeplastida
GSVIVT01017698001 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g46340.1 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.03 Archaeplastida
LOC_Os11g01439.1 No alias motility factor (CHUP) 0.02 Archaeplastida
Mp7g03540.1 No alias motility factor (CHUP) 0.02 Archaeplastida
Pp3c6_26200V3.1 No alias Hydroxyproline-rich glycoprotein family protein 0.03 Archaeplastida
Solyc02g069560.3.1 No alias Protein CHUP1, chloroplastic OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e032492_P004 No alias regulatory protein (IPGA) of cortical microtubule organisation 0.05 Archaeplastida
Zm00001e032505_P001 No alias motility factor (CHUP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!