GSVIVT01024723001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type


Gene families : OG0001274 (Archaeplastida) Phylogenetic Tree(s): OG0001274_tree ,
OG_05_0009212 (LandPlants) Phylogenetic Tree(s): OG_05_0009212_tree ,
OG_06_0012778 (SeedPlants) Phylogenetic Tree(s): OG_06_0012778_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01024723001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00145170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT1G68940 No alias Armadillo/beta-catenin-like repeat family protein 0.04 Archaeplastida
AT1G76390 No alias ARM repeat superfamily protein 0.05 Archaeplastida
Gb_20043 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_23646 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
LOC_Os03g45420.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
LOC_Os06g16410.1 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
LOC_Os12g17880.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Mp8g11800.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Pp3c18_14130V3.1 No alias ARM repeat superfamily protein 0.02 Archaeplastida
Smo165881 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc04g082570.3.1 No alias E3 ubiquitin ligase (PUB) 0.08 Archaeplastida
Zm00001e023438_P004 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Zm00001e023512_P001 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Zm00001e036817_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e039535_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 886 922
IPR003613 Ubox_domain 245 317
No external refs found!