GSVIVT01025082001

Description : External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.phototropin photoreceptor

Gene families : OG0000079 (Archaeplastida) Phylogenetic Tree(s): OG0000079_tree ,
OG_05_0002077 (LandPlants) Phylogenetic Tree(s): OG_05_0002077_tree ,
OG_06_0002753 (SeedPlants) Phylogenetic Tree(s): OG_06_0002753_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025082001
Cluster	HCCA: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00188850	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.7...	0.02	Archaeplastida
AT2G34650	PID, ABR	Protein kinase superfamily protein	0.02	Archaeplastida
AT3G44610	No alias	Protein kinase superfamily protein	0.04	Archaeplastida
AT3G45780	RPT1, PHOT1, NPH1, JK224	phototropin 1	0.03	Archaeplastida
AT5G55910	D6PK	D6 protein kinase	0.03	Archaeplastida
Cpa\|evm.model.tig00000093.82	No alias	Protein modification.phosphorylation.AGC kinase...	0.02	Archaeplastida
Gb_00478	No alias	PINOID auxin transport regulator kinase. protein kinase...	0.03	Archaeplastida
LOC_Os02g39090.1	No alias	Serine/threonine-protein kinase OXI1 OS=Arabidopsis...	0.04	Archaeplastida
LOC_Os03g14840.1	No alias	protein kinase (AGC-VIII)	0.03	Archaeplastida
LOC_Os12g29580.1	No alias	protein kinase (AGC-VIII)	0.02	Archaeplastida
MA_108401g0020	No alias	PINOID auxin transport regulator kinase. protein kinase...	0.03	Archaeplastida
MA_4817656g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_89422g0010	No alias	PINOID auxin transport regulator kinase. protein kinase...	0.03	Archaeplastida
Pp3c19_10230V3.1	No alias	phototropin 2	0.02	Archaeplastida
Pp3c2_10380V3.1	No alias	phototropin 1	0.02	Archaeplastida
Solyc01g097770.4.1	No alias	protein kinase (AGC-VIII). phototropin light receptor....	0.03	Archaeplastida
Solyc07g065710.3.1	No alias	protein kinase (AGC-VIII)	0.04	Archaeplastida
Solyc11g007250.2.1	No alias	Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis...	0.08	Archaeplastida
Solyc11g072710.3.1	No alias	phototropin light receptor. phototropin photoreceptor	0.03	Archaeplastida
Zm00001e003235_P001	No alias	PINOID auxin transport regulator kinase. protein kinase...	0.03	Archaeplastida
Zm00001e016743_P001	No alias	PINOID auxin transport regulator kinase. protein kinase...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0004536	deoxyribonuclease activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006000	fructose metabolic process	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008175	tRNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008297	single-stranded DNA exodeoxyribonuclease activity	IEP	Neighborhood
MF	GO:0008409	5'-3' exonuclease activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
MF	GO:0016426	tRNA (adenine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity	IEP	Neighborhood
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0030488	tRNA methylation	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
CC	GO:0031515	tRNA (m1A) methyltransferase complex	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
CC	GO:0034708	methyltransferase complex	IEP	Neighborhood
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
CC	GO:0043527	tRNA methyltransferase complex	IEP	Neighborhood
MF	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	629	913
IPR000014	PAS	170	266
IPR000014	PAS	448	540

External Links

No external refs found!

GSVIVT01025082001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation