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  5. GSVIVT01025257001

GSVIVT01025257001


Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RbcX assembly factor


Gene families : OG0006006 (Archaeplastida) Phylogenetic Tree(s): OG0006006_tree ,
OG_05_0005006 (LandPlants) Phylogenetic Tree(s): OG_05_0005006_tree ,
OG_06_0005189 (SeedPlants) Phylogenetic Tree(s): OG_06_0005189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025257001
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00120350 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Cpa|evm.model.tig00021537.55 No alias No description available 0.02 Archaeplastida
Gb_25794 No alias RbcX assembly factor involved in RuBisCo assembly 0.04 Archaeplastida
LOC_Os03g59320.1 No alias RbcX assembly factor involved in RuBisCo assembly 0.04 Archaeplastida
MA_129980g0010 No alias RbcX assembly factor involved in RuBisCo assembly 0.05 Archaeplastida
Pp3c9_10480V3.1 No alias Chaperonin-like RbcX protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016849 phosphorus-oxygen lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003435 Chaperonin_RcbX 54 153
No external refs found!