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  5. AMTR_s00041p00216070

AMTR_s00041p00216070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.233

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana


Gene families : OG0001344 (Archaeplastida) Phylogenetic Tree(s): OG0001344_tree ,
OG_05_0001222 (LandPlants) Phylogenetic Tree(s): OG_05_0001222_tree ,
OG_06_0000752 (SeedPlants) Phylogenetic Tree(s): OG_06_0000752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00216070
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00208990 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00213600 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00041p00219760 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G34880 No alias Amidase family protein 0.02 Archaeplastida
GSVIVT01024065001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024070001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_49284g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo234630 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g111220.3.1 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR000120 Amidase 1 90
No external refs found!