GSVIVT01025638001

Description : Elongation factor 1-alpha OS=Zea mays

Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0000317 (LandPlants) Phylogenetic Tree(s): OG_05_0000317_tree ,
OG_06_0000423 (SeedPlants) Phylogenetic Tree(s): OG_06_0000423_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01025638001
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00216110	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.06	Archaeplastida
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.04	Archaeplastida
Cpa\|evm.model.tig00021352.57	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.04	Archaeplastida
Cre06.g263450	No alias	Elongation factor 1-alpha OS=Glycine max	0.01	Archaeplastida
LOC_Os03g08010.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	Archaeplastida
LOC_Os03g08020.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	Archaeplastida
LOC_Os03g08050.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	Archaeplastida
MA_9512579g0020	No alias	Elongation factor 1-alpha OS=Glycine max...	0.02	Archaeplastida
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.09	Archaeplastida
Pp3c1_23750V3.1	No alias	GTP binding Elongation factor Tu family protein	0.02	Archaeplastida
Pp3c1_23850V3.1	No alias	GTP binding Elongation factor Tu family protein	0.03	Archaeplastida
Pp3c1_23920V3.1	No alias	GTP binding Elongation factor Tu family protein	0.05	Archaeplastida
Pp3c2_6690V3.1	No alias	GTP binding Elongation factor Tu family protein	0.02	Archaeplastida
Smo270693	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.02	Archaeplastida
Zm00001e026762_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.06	Archaeplastida
Zm00001e026763_P003	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.06	Archaeplastida
Zm00001e031389_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e031390_P004	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.06	Archaeplastida
Zm00001e031391_P002	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.06	Archaeplastida
Zm00001e031407_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.05	Archaeplastida
Zm00001e037355_P001	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0005787	signal peptidase complex	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
CC	GO:0005856	cytoskeleton	IEP	Neighborhood
CC	GO:0005885	Arp2/3 protein complex	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006465	signal peptide processing	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0007015	actin filament organization	IEP	Neighborhood
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
BP	GO:0010638	positive regulation of organelle organization	IEP	Neighborhood
CC	GO:0015629	actin cytoskeleton	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
CC	GO:0030008	TRAPP complex	IEP	Neighborhood
BP	GO:0030832	regulation of actin filament length	IEP	Neighborhood
BP	GO:0030833	regulation of actin filament polymerization	IEP	Neighborhood
BP	GO:0030838	positive regulation of actin filament polymerization	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
BP	GO:0031334	positive regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0032271	regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032273	positive regulation of protein polymerization	IEP	Neighborhood
BP	GO:0032535	regulation of cellular component size	IEP	Neighborhood
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Neighborhood
BP	GO:0032970	regulation of actin filament-based process	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
BP	GO:0033043	regulation of organelle organization	IEP	Neighborhood
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0042393	histone binding	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043254	regulation of protein complex assembly	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0045010	actin nucleation	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Neighborhood
BP	GO:0051604	protein maturation	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0090066	regulation of anatomical structure size	IEP	Neighborhood
BP	GO:0097435	supramolecular fiber organization	IEP	Neighborhood
BP	GO:0110053	regulation of actin filament organization	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Neighborhood
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Neighborhood
CC	GO:1905368	peptidase complex	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	111	159
IPR000795	TF_GTP-bd_dom	8	58

External Links

No external refs found!

GSVIVT01025638001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation