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  5. GSVIVT01025660001

GSVIVT01025660001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025660001
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.12 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.04 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.06 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.23 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.05 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.22 Archaeplastida
GSVIVT01020616001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.13 Archaeplastida
Gb_02823 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g06580.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os01g47780.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os02g20540.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os05g07060.1 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
LOC_Os05g48890.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os05g48900.1 No alias fasciclin-type arabinogalactan protein 0.12 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os09g30486.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
MA_309953g0010 No alias Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis... 0.02 Archaeplastida
MA_5195g0010 No alias Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis... 0.09 Archaeplastida
MA_59950g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.2 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.2 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.2 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.2 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e024743_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e027481_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 46 178
No external refs found!