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  5. GSVIVT01025703001

GSVIVT01025703001


Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.phenylalanine ammonia lyase (PAL)


Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0010412 (SeedPlants) Phylogenetic Tree(s): OG_06_0010412_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01025703001
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AMTR_s00024p00201930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AMTR_s00024p00202590 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
AMTR_s00032p00159210 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.07 Archaeplastida
AMTR_s00148p00088930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.09 Archaeplastida
AT3G10340 PAL4 phenylalanine ammonia-lyase 4 0.03 Archaeplastida
AT3G53260 ATPAL2, PAL2 phenylalanine ammonia-lyase 2 0.06 Archaeplastida
GSVIVT01006148001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01015138001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01024295001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024299001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024306001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024315001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Gb_01672 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Gb_16672 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_21115 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Gb_25608 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Gb_31408 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_41796 No alias phenylalanine ammonia lyase (PAL) 0.11 Archaeplastida
LOC_Os02g41630.2 No alias phenylalanine ammonia lyase (PAL) 0.13 Archaeplastida
LOC_Os02g41650.3 No alias phenylalanine ammonia lyase (PAL) 0.14 Archaeplastida
LOC_Os02g41670.1 No alias phenylalanine ammonia lyase (PAL) 0.07 Archaeplastida
LOC_Os02g41680.1 No alias phenylalanine ammonia lyase (PAL) 0.08 Archaeplastida
LOC_Os04g43760.1 No alias phenylalanine ammonia lyase (PAL) 0.17 Archaeplastida
LOC_Os04g43800.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
LOC_Os05g35290.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
LOC_Os11g48110.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
MA_123220g0010 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_189052g0010 No alias Phenylalanine ammonia-lyase OS=Pinus taeda... 0.04 Archaeplastida
MA_44561g0010 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
MA_5862513g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_632036g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_73113g0010 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Mp1g05220.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp4g14110.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp4g14140.1 No alias phenylalanine ammonia lyase (PAL) 0.08 Archaeplastida
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Pp3c10_21810V3.1 No alias phenylalanine ammonia-lyase 4 0.05 Archaeplastida
Pp3c13_9000V3.1 No alias phenylalanine ammonia-lyase 4 0.07 Archaeplastida
Pp3c14_11870V3.1 No alias PHE ammonia lyase 1 0.08 Archaeplastida
Pp3c19_13690V3.1 No alias phenylalanine ammonia-lyase 4 0.06 Archaeplastida
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.05 Archaeplastida
Pp3c1_18940V3.1 No alias PHE ammonia lyase 1 0.06 Archaeplastida
Pp3c21_7640V3.1 No alias phenylalanine ammonia-lyase 2 0.03 Archaeplastida
Pp3c21_7680V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c24_13110V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c2_30610V3.1 No alias phenylalanine ammonia-lyase 4 0.07 Archaeplastida
Pp3c2_32330V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c2_32410V3.1 No alias phenylalanine ammonia-lyase 4 0.04 Archaeplastida
Smo424403 No alias Phenylalanine ammonia-lyase OS=Citrus limon 0.02 Archaeplastida
Solyc05g056170.3.1 No alias phenylalanine ammonia lyase (PAL) 0.1 Archaeplastida
Solyc10g011925.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g086180.2.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e005064_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e015155_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e015157_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e023031_P002 No alias phenylalanine ammonia lyase (PAL) 0.08 Archaeplastida
Zm00001e023032_P002 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Zm00001e023033_P001 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0015629 actin cytoskeleton IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 186 368
IPR001106 Aromatic_Lyase 2 183
No external refs found!