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  5. AMTR_s00041p00237250

AMTR_s00041p00237250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.299

No description available


Gene families : OG0007160 (Archaeplastida) Phylogenetic Tree(s): OG0007160_tree ,
OG_05_0005139 (LandPlants) Phylogenetic Tree(s): OG_05_0005139_tree ,
OG_06_0003336 (SeedPlants) Phylogenetic Tree(s): OG_06_0003336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00237250
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00232840 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00041p00233390 evm_27.TU.AmTr_v1... BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00041p00235540 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00041p00235950 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00041p00236790 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00041p00237050 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00041p00237630 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 62 113
No external refs found!