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  5. GSVIVT01026868001

GSVIVT01026868001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0002418 (SeedPlants) Phylogenetic Tree(s): OG_06_0002418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026868001
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.03 Archaeplastida
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.05 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.06 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.03 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.04 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.05 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.07 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.04 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.04 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.04 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.03 Archaeplastida
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.06 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.06 Archaeplastida
Cpa|evm.model.tig00000663.2 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre16.g677382 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g26130.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g45060.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g15020.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_82197g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_89624g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g009650.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g067340.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001404_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001409_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e015145_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020963_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034807_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041551_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!