1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01026879001

GSVIVT01026879001


Description : Cytoskeleton.microfilament network.actin polymerisation.cofilin-like actin depolymerizing factor


Gene families : OG0000480 (Archaeplastida) Phylogenetic Tree(s): OG0000480_tree ,
OG_05_0114120 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0092319 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01026879001
Cluster HCCA: Cluster_488

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00126220 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.07 Archaeplastida
AMTR_s00018p00214610 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
AMTR_s00140p00036970 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.06 Archaeplastida
AT1G01750 ADF11 actin depolymerizing factor 11 0.09 Archaeplastida
AT2G16700 ADF5, ATADF5 actin depolymerizing factor 5 0.03 Archaeplastida
AT4G00680 ADF8 actin depolymerizing factor 8 0.08 Archaeplastida
AT4G34970 ADF9 actin depolymerizing factor 9 0.04 Archaeplastida
AT5G52360 ADF10 actin depolymerizing factor 10 0.03 Archaeplastida
GSVIVT01027807001 No alias Cytoskeleton.microfilament network.actin... 0.05 Archaeplastida
Gb_20929 No alias actin-depolymerizing factor 0.03 Archaeplastida
LOC_Os02g44470.1 No alias actin-depolymerizing factor 0.09 Archaeplastida
LOC_Os03g60580.1 No alias actin-depolymerizing factor 0.02 Archaeplastida
LOC_Os04g46910.1 No alias actin-depolymerizing factor 0.09 Archaeplastida
LOC_Os07g30090.2 No alias actin-depolymerizing factor 0.07 Archaeplastida
MA_10342253g0010 No alias actin-depolymerizing factor 0.04 Archaeplastida
MA_10433573g0020 No alias actin-depolymerizing factor 0.03 Archaeplastida
Mp1g17660.1 No alias actin-depolymerizing factor 0.08 Archaeplastida
Mp3g20570.1 No alias actin-depolymerizing factor 0.05 Archaeplastida
Solyc01g094400.3.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Solyc01g111380.3.1 No alias actin-depolymerizing factor 0.04 Archaeplastida
Solyc03g025750.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g017550.4.1 No alias actin-depolymerizing factor 0.09 Archaeplastida
Zm00001e007293_P001 No alias actin-depolymerizing factor 0.1 Archaeplastida
Zm00001e010368_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e015357_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023183_P001 No alias actin-depolymerizing factor 0.08 Archaeplastida
Zm00001e034985_P001 No alias actin-depolymerizing factor 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR002108 ADF-H 131 252
No external refs found!