GSVIVT01027197001

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type

Gene families : OG0001367 (Archaeplastida) Phylogenetic Tree(s): OG0001367_tree ,
OG_05_0001852 (LandPlants) Phylogenetic Tree(s): OG_05_0001852_tree ,
OG_06_0011223 (SeedPlants) Phylogenetic Tree(s): OG_06_0011223_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01027197001
Cluster	HCCA: Cluster_226

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268880	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
AMTR_s00041p00118190	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
AMTR_s00053p00044540	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
Gb_11374	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida
LOC_Os01g72000.1	No alias	E3 ubiquitin ligase (PUB)	0.06	Archaeplastida
MA_63057g0020	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida
Pp3c12_4020V3.1	No alias	Armadillo/beta-catenin-like repeat family protein	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0005996	monosaccharide metabolic process	IEP	Neighborhood
BP	GO:0006013	mannose metabolic process	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0008378	galactosyltransferase activity	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	265	331

External Links

No external refs found!

GSVIVT01027197001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation