GSVIVT01027345001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0092360 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01027345001
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00066p00028460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00202p00017170	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.01	Archaeplastida
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.07	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os04g42570.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os06g05340.1	No alias	transcription factor (AP2). RAM1-dependent transcription...	0.02	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_2193g0020	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c10_24550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c15_4400V3.1	No alias	target of early activation tagged (EAT) 2	0.02	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g096860.3.1	No alias	transcription factor (AP2)	0.07	Archaeplastida
Solyc03g123430.4.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc04g077490.3.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc11g008560.2.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc11g061750.2.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Solyc12g010490.3.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Zm00001e009225_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida
Zm00001e015104_P001	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e018951_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e027593_P003	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e029525_P003	No alias	transcription factor (AP2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008417	fucosyltransferase activity	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0042546	cell wall biogenesis	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	59	114
IPR001471	AP2/ERF_dom	154	202

External Links

No external refs found!

GSVIVT01027345001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation