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  5. GSVIVT01027429001

GSVIVT01027429001


Description : Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0008052 (LandPlants) Phylogenetic Tree(s): OG_05_0008052_tree ,
OG_06_0005013 (SeedPlants) Phylogenetic Tree(s): OG_06_0005013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01027429001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00053p00180370 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G01110 IQD18 IQ-domain 18 0.04 Archaeplastida
AT1G72670 iqd8 IQ-domain 8 0.02 Archaeplastida
AT4G10640 IQD16 IQ-domain 16 0.02 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.02 Archaeplastida
Gb_40747 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.02 Archaeplastida
LOC_Os03g57330.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g06160.2 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo67789 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g083240.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016563_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037612_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025064 DUF4005 398 505
IPR000048 IQ_motif_EF-hand-BS 139 157
IPR000048 IQ_motif_EF-hand-BS 163 179
No external refs found!