GSVIVT01027770001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000066 (SeedPlants) Phylogenetic Tree(s): OG_06_0000066_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01027770001
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00264660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.06	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.03	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G32800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01018270001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01018271001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01028314001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01033795001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036201001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_10809	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.03	Archaeplastida
Gb_17210	No alias	transcription factor (DREB). C2H2 zinc finger...	0.03	Archaeplastida
Gb_17212	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_24891	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.05	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_36010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10031781g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_100724g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10434101g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10434489g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_168025g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_17001g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_180106g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_288689g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_420358g0010	No alias	Ethylene-responsive transcription factor 1A...	0.06	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_428433g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_8574268g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_9260020g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9588449g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_96512g0020	No alias	Ethylene-responsive transcription factor ERF071...	0.03	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c10_7030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c3_33930V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c4_23930V3.1	No alias	ethylene responsive element binding factor 1	0.03	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c4_31920V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c7_1240V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Smo409196	No alias	External stimuli response.biotic...	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc01g065980.4.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.02	Archaeplastida
Solyc03g005520.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc03g095973.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089920.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc12g009490.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e000608_P002	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e021282_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e030090_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.04	Archaeplastida
Zm00001e034741_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e035837_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004089	carbonate dehydratase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
MF	GO:0018580	nitronate monooxygenase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	20	70

External Links

No external refs found!

GSVIVT01027770001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation