Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01028041001 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
AMTR_s00129p00044320 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.04 | Archaeplastida | |
AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT2G43050 | ATPMEPCRD | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G49220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.04 | Archaeplastida | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT5G49180 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
GSVIVT01017687001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01031164001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01037348001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
Gb_06356 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_10522 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Gb_21388 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_25439 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_35881 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_36005 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
LOC_Os03g18860.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os04g38560.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os04g54850.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os07g47830.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os07g49100.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os09g26360.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os11g08750.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os11g36240.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
MA_130858g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_26888g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_648837g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_84680g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
MA_96515g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp6g15150.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c15_12280V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.04 | Archaeplastida | |
Pp3c18_170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
Pp3c21_22110V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c26_2170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
Pp3c8_3840V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Smo266995 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
Solyc01g066360.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc01g066390.4.1 | No alias | Probable pectinesterase/pectinesterase inhibitor 58... | 0.04 | Archaeplastida | |
Solyc01g099940.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc01g099960.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g078090.4.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc03g078100.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc03g083840.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc07g017560.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Solyc07g064180.4.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Solyc09g075350.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc11g005770.2.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc12g099410.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e007917_P002 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e009863_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e022184_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e034231_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e035838_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Zm00001e035932_P003 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e041757_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
MF | GO:0004061 | arylformamidase activity | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Neighborhood |
MF | GO:0004568 | chitinase activity | IEP | Neighborhood |
MF | GO:0004620 | phospholipase activity | IEP | Neighborhood |
MF | GO:0004629 | phospholipase C activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Neighborhood |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Neighborhood |
BP | GO:0006030 | chitin metabolic process | IEP | Neighborhood |
BP | GO:0006032 | chitin catabolic process | IEP | Neighborhood |
BP | GO:0006040 | amino sugar metabolic process | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
BP | GO:0006568 | tryptophan metabolic process | IEP | Neighborhood |
BP | GO:0006569 | tryptophan catabolic process | IEP | Neighborhood |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
BP | GO:0006586 | indolalkylamine metabolic process | IEP | Neighborhood |
BP | GO:0006820 | anion transport | IEP | Neighborhood |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
BP | GO:0009063 | cellular amino acid catabolic process | IEP | Neighborhood |
BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Neighborhood |
BP | GO:0009310 | amine catabolic process | IEP | Neighborhood |
BP | GO:0010215 | cellulose microfibril organization | IEP | Neighborhood |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
BP | GO:0015689 | molybdate ion transport | IEP | Neighborhood |
CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
BP | GO:0016049 | cell growth | IEP | Neighborhood |
BP | GO:0016054 | organic acid catabolic process | IEP | Neighborhood |
MF | GO:0016298 | lipase activity | IEP | Neighborhood |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Neighborhood |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030198 | extracellular matrix organization | IEP | Neighborhood |
MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
CC | GO:0031225 | anchored component of membrane | IEP | Neighborhood |
BP | GO:0040007 | growth | IEP | Neighborhood |
BP | GO:0042180 | cellular ketone metabolic process | IEP | Neighborhood |
BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Neighborhood |
BP | GO:0042430 | indole-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0042436 | indole-containing compound catabolic process | IEP | Neighborhood |
BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
BP | GO:0043062 | extracellular structure organization | IEP | Neighborhood |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
BP | GO:0046218 | indolalkylamine catabolic process | IEP | Neighborhood |
BP | GO:0046348 | amino sugar catabolic process | IEP | Neighborhood |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0070189 | kynurenine metabolic process | IEP | Neighborhood |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Neighborhood |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Neighborhood |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Neighborhood |
No external refs found! |