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Description : RING/U-box superfamily protein
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0008073 (SeedPlants) Phylogenetic Tree(s): OG_06_0008073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G49200 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00161170 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | Archaeplastida | |
| AMTR_s00056p00122930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| AT1G67856 | No alias | RING/U-box superfamily protein | 0.06 | Archaeplastida | |
| AT3G14320 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.07 | Archaeplastida | |
| AT3G61550 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT4G38140 | No alias | RING/U-box superfamily protein | 0.08 | Archaeplastida | |
| AT4G40070 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
| AT5G17600 | No alias | RING/U-box superfamily protein | 0.05 | Archaeplastida | |
| Cre01.g009101 | No alias | No description available | 0.04 | Archaeplastida | |
| Cre01.g051700 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
| Gb_14775 | No alias | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
| Gb_14777 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Gb_14788 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Gb_23076 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os01g11460.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os01g11520.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
| LOC_Os02g15060.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os02g35144.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os02g35347.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| LOC_Os02g35365.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| LOC_Os02g36300.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os02g37450.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os02g45780.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os03g57410.1 | No alias | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | Archaeplastida | |
| LOC_Os04g49000.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os04g49550.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| LOC_Os05g39260.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| LOC_Os06g45580.1 | No alias | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os07g34180.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os09g36500.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| LOC_Os10g39770.1 | No alias | NEP1-interacting protein 2 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os12g02220.1 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| LOC_Os12g40460.1 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| MA_10208579g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10436650g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_12363g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| MA_126287g0010 | No alias | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... | 0.08 | Archaeplastida | |
| MA_152783g0010 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| MA_214717g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_5319g0010 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| MA_6931619g0010 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| MA_8090362g0010 | No alias | Acetyl-CoA carboxylase 1 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
| Pp3c17_13190V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_32230V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Pp3c23_1651V3.1 | No alias | RING/U-box superfamily protein | 0.04 | Archaeplastida | |
| Pp3c26_11650V3.1 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Archaeplastida | |
| Pp3c4_30240V3.1 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Archaeplastida | |
| Pp3c5_4170V3.1 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
| Smo412609 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
| Smo96681 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.08 | Archaeplastida | |
| Solyc01g006910.4.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Solyc05g055390.3.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Solyc06g053640.1.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Solyc09g066300.3.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Solyc09g075320.1.1 | No alias | RING-H2-class E3 ligase | 0.08 | Archaeplastida | |
| Solyc11g066510.3.1 | No alias | RING-H2-class E3 ligase | 0.07 | Archaeplastida | |
| Zm00001e003126_P001 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Zm00001e003264_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e003426_P001 | No alias | ubiquitin protein ligase (XERICO) | 0.06 | Archaeplastida | |
| Zm00001e007956_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e010787_P001 | No alias | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Zm00001e011306_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e011901_P001 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Zm00001e013809_P001 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida | |
| Zm00001e014764_P001 | No alias | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| Zm00001e015470_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e015905_P001 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| Zm00001e017509_P001 | No alias | no hits & (original description: none) | 0.08 | Archaeplastida | |
| Zm00001e018028_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e021729_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e022538_P002 | No alias | NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Zm00001e023234_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e024702_P002 | No alias | NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| Zm00001e029032_P001 | No alias | RING-H2-class E3 ligase | 0.05 | Archaeplastida | |
| Zm00001e030102_P001 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
| Zm00001e032186_P001 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| Zm00001e037108_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e041385_P001 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
| Zm00001e041409_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Neighborhood |
| BP | GO:0001101 | response to acid chemical | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006949 | syncytium formation | IEP | Neighborhood |
| BP | GO:0006950 | response to stress | IEP | Neighborhood |
| BP | GO:0006970 | response to osmotic stress | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| BP | GO:0007623 | circadian rhythm | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009638 | phototropism | IEP | Neighborhood |
| BP | GO:0009639 | response to red or far red light | IEP | Neighborhood |
| BP | GO:0009648 | photoperiodism | IEP | Neighborhood |
| BP | GO:0009651 | response to salt stress | IEP | Neighborhood |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009723 | response to ethylene | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009733 | response to auxin | IEP | Neighborhood |
| BP | GO:0009734 | auxin-activated signaling pathway | IEP | Neighborhood |
| BP | GO:0009737 | response to abscisic acid | IEP | Neighborhood |
| BP | GO:0009739 | response to gibberellin | IEP | Neighborhood |
| BP | GO:0009751 | response to salicylic acid | IEP | Neighborhood |
| BP | GO:0009753 | response to jasmonic acid | IEP | Neighborhood |
| BP | GO:0009755 | hormone-mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0009828 | plant-type cell wall loosening | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010017 | red or far-red light signaling pathway | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0010114 | response to red light | IEP | Neighborhood |
| BP | GO:0010119 | regulation of stomatal movement | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010600 | regulation of auxin biosynthetic process | IEP | Neighborhood |
| BP | GO:0014070 | response to organic cyclic compound | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032350 | regulation of hormone metabolic process | IEP | Neighborhood |
| BP | GO:0033993 | response to lipid | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| BP | GO:0042493 | response to drug | IEP | Neighborhood |
| BP | GO:0042752 | regulation of circadian rhythm | IEP | Neighborhood |
| BP | GO:0042754 | negative regulation of circadian rhythm | IEP | Neighborhood |
| BP | GO:0043433 | negative regulation of DNA-binding transcription factor activity | IEP | Neighborhood |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Neighborhood |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Neighborhood |
| BP | GO:0046677 | response to antibiotic | IEP | Neighborhood |
| BP | GO:0046885 | regulation of hormone biosynthetic process | IEP | Neighborhood |
| BP | GO:0048511 | rhythmic process | IEP | Neighborhood |
| BP | GO:0048571 | long-day photoperiodism | IEP | Neighborhood |
| BP | GO:0048573 | photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0048574 | long-day photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051090 | regulation of DNA-binding transcription factor activity | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071478 | cellular response to radiation | IEP | Neighborhood |
| BP | GO:0071482 | cellular response to light stimulus | IEP | Neighborhood |
| BP | GO:0071489 | cellular response to red or far red light | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0090354 | regulation of auxin metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0097305 | response to alcohol | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 135 | 178 |
| No external refs found! |