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  5. GSVIVT01028231001

GSVIVT01028231001


Description : Cell wall.pectin.modification and degradation.pectin acetylesterase


Gene families : OG0000465 (Archaeplastida) Phylogenetic Tree(s): OG0000465_tree ,
OG_05_0000277 (LandPlants) Phylogenetic Tree(s): OG_05_0000277_tree ,
OG_06_0000320 (SeedPlants) Phylogenetic Tree(s): OG_06_0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028231001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00148030 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectin... 0.04 Archaeplastida
AT1G09550 No alias Pectinacetylesterase family protein 0.04 Archaeplastida
AT2G46930 No alias Pectinacetylesterase family protein 0.02 Archaeplastida
AT3G05910 No alias Pectinacetylesterase family protein 0.06 Archaeplastida
Gb_06563 No alias pectin acetylesterase 0.04 Archaeplastida
Gb_15309 No alias pectin acetylesterase 0.06 Archaeplastida
LOC_Os01g21630.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os01g66830.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os01g66840.1 No alias pectin acetylesterase 0.03 Archaeplastida
LOC_Os07g44070.1 No alias pectin acetylesterase 0.07 Archaeplastida
LOC_Os10g40290.1 No alias Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_3303g0010 No alias pectin acetylesterase 0.03 Archaeplastida
MA_52077g0010 No alias pectin acetylesterase 0.03 Archaeplastida
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.04 Archaeplastida
Solyc08g005800.4.1 No alias pectin acetylesterase 0.04 Archaeplastida
Zm00001e017068_P001 No alias pectin acetylesterase 0.05 Archaeplastida
Zm00001e035651_P001 No alias pectin acetylesterase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 144 490
No external refs found!