GSVIVT01028256001


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000418 (LandPlants) Phylogenetic Tree(s): OG_05_0000418_tree ,
OG_06_0000295 (SeedPlants) Phylogenetic Tree(s): OG_06_0000295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028256001
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00108620 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.07 Archaeplastida
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00145p00075460 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT2G47000 ATPGP4, PGP4, ABCB4, MDR4 ATP binding cassette subfamily B4 0.04 Archaeplastida
AT3G28345 No alias ABC transporter family protein 0.06 Archaeplastida
AT3G62150 PGP21 P-glycoprotein 21 0.1 Archaeplastida
AT4G18050 PGP9 P-glycoprotein 9 0.03 Archaeplastida
AT4G25960 PGP2 P-glycoprotein 2 0.04 Archaeplastida
Cpa|evm.model.tig00000572.5 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01000580001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021365001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_02468 No alias subfamily ABCB transporter 0.08 Archaeplastida
Gb_02469 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_07563 No alias subfamily ABCB transporter 0.05 Archaeplastida
Gb_08614 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_08702 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_10211 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_11202 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_13906 No alias subfamily ABCB transporter 0.05 Archaeplastida
Gb_13908 No alias ABC transporter B family member 10 OS=Arabidopsis... 0.03 Archaeplastida
Gb_27347 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_32125 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_33057 No alias subfamily ABCB transporter 0.05 Archaeplastida
Gb_33058 No alias subfamily ABCB transporter 0.06 Archaeplastida
Gb_36497 No alias subfamily ABCB transporter 0.04 Archaeplastida
Gb_38960 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os01g18670.1 No alias subfamily ABCB transporter 0.05 Archaeplastida
LOC_Os01g35030.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g50080.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os01g50160.1 No alias subfamily ABCB transporter 0.07 Archaeplastida
LOC_Os02g09720.1 No alias subfamily ABCB transporter 0.06 Archaeplastida
LOC_Os05g47500.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
LOC_Os08g45030.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10432922g0010 No alias subfamily ABCB transporter 0.05 Archaeplastida
MA_10436810g0020 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_107576g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_111099g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_18863g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_61717g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6870g0010 No alias subfamily ABCB transporter 0.05 Archaeplastida
MA_83806g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_929827g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_934204g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
Mp1g26440.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Mp2g11920.1 No alias subfamily ABCB transporter 0.05 Archaeplastida
Mp3g11830.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Mp7g04390.1 No alias subfamily ABCB transporter 0.07 Archaeplastida
Pp3c17_16450V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Pp3c1_34680V3.1 No alias P-glycoprotein 10 0.03 Archaeplastida
Pp3c1_7210V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Pp3c1_7215V3.1 No alias ATP binding cassette subfamily B19 0.03 Archaeplastida
Smo123915 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo229984 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo230688 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Smo231714 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo408755 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo419451 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Smo99885 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc03g093650.3.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.05 Archaeplastida
Solyc06g009290.4.1 No alias subfamily ABCB transporter 0.06 Archaeplastida
Solyc08g076720.4.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
Solyc11g067300.2.1 No alias subfamily ABCB transporter 0.05 Archaeplastida
Solyc11g067310.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e017444_P002 No alias subfamily ABCB transporter 0.04 Archaeplastida
Zm00001e023274_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e025063_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025438_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0004594 pantothenate kinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
BP GO:0015937 coenzyme A biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 413 560
IPR011527 ABC1_TM_dom 723 879
IPR011527 ABC1_TM_dom 669 720
IPR011527 ABC1_TM_dom 70 344
IPR003439 ABC_transporter-like 948 1097
No external refs found!