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  5. GSVIVT01028421001

GSVIVT01028421001


No description available


Gene families : OG0002977 (Archaeplastida) Phylogenetic Tree(s): OG0002977_tree ,
OG_05_0002339 (LandPlants) Phylogenetic Tree(s): OG_05_0002339_tree ,
OG_06_0002649 (SeedPlants) Phylogenetic Tree(s): OG_06_0002649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028421001
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00179p00033790 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G04080 PRP39 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Cre16.g670300 No alias No description available 0.02 Archaeplastida
LOC_Os03g11200.1 No alias pre-mRNA-processing protein (PRP39) 0.05 Archaeplastida
MA_6626g0010 No alias pre-mRNA-processing protein (PRP39) 0.02 Archaeplastida
Mp6g00560.1 No alias pre-mRNA-processing protein (PRP39) 0.02 Archaeplastida
Pp3c1_23160V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Pp3c2_14560V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
Zm00001e000702_P004 No alias pre-mRNA-processing protein (PRP39) 0.03 Archaeplastida
Zm00001e038749_P003 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006474 N-terminal protein amino acid acetylation IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Neighborhood
BP GO:0018206 peptidyl-methionine modification IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Neighborhood
CC GO:0031417 NatC complex IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!