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  5. GSVIVT01028479001

GSVIVT01028479001


Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002684 (Archaeplastida) Phylogenetic Tree(s): OG0002684_tree ,
OG_05_0008842 (LandPlants) Phylogenetic Tree(s): OG_05_0008842_tree ,
OG_06_0009438 (SeedPlants) Phylogenetic Tree(s): OG_06_0009438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028479001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Archaeplastida
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.01 Archaeplastida
LOC_Os01g25600.1 No alias LPA1 protein involved in PS-II assembly 0.03 Archaeplastida
LOC_Os04g42800.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 Archaeplastida
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 Archaeplastida
Pp3c12_5470V3.1 No alias No annotation 0.07 Archaeplastida
Solyc09g074880.4.1 No alias No annotation 0.03 Archaeplastida
Zm00001e017629_P003 No alias LPA1 protein involved in PS-II assembly 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR021883 LPA1-like 93 168
No external refs found!