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  5. GSVIVT01028685001

GSVIVT01028685001


Description : Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana


Gene families : OG0002496 (Archaeplastida) Phylogenetic Tree(s): OG0002496_tree ,
OG_05_0002072 (LandPlants) Phylogenetic Tree(s): OG_05_0002072_tree ,
OG_06_0003303 (SeedPlants) Phylogenetic Tree(s): OG_06_0003303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01028685001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00023420 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 A... 0.04 Archaeplastida
AMTR_s00045p00026940 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 A... 0.03 Archaeplastida
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.07 Archaeplastida
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.17 Archaeplastida
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.12 Archaeplastida
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.16 Archaeplastida
LOC_Os05g51550.1 No alias Chromatin modification-related protein EAF1 B... 0.05 Archaeplastida
LOC_Os08g08000.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.05 Archaeplastida
MA_16444g0030 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.03 Archaeplastida
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.1 Archaeplastida
MA_79062g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.09 Archaeplastida
Pp3c26_13270V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.14 Archaeplastida
Pp3c26_13460V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.11 Archaeplastida
Pp3c26_13463V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.05 Archaeplastida
Pp3c4_31630V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.13 Archaeplastida
Pp3c7_10800V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.15 Archaeplastida
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.02 Archaeplastida
Solyc06g083420.3.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.13 Archaeplastida
Solyc09g060080.4.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.11 Archaeplastida
Zm00001e020520_P002 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.16 Archaeplastida
Zm00001e020521_P001 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.09 Archaeplastida
Zm00001e026671_P001 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014012 HSA_dom 534 566
No external refs found!