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Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PAM68 protein
Gene families : OG0004385 (Archaeplastida) Phylogenetic Tree(s): OG0004385_tree ,
OG_05_0004567 (LandPlants) Phylogenetic Tree(s): OG_05_0004567_tree ,
OG_06_0004117 (SeedPlants) Phylogenetic Tree(s): OG_06_0004117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01028843001 | |
| Cluster | HCCA: Cluster_52 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00088520 | evm_27.TU.AmTr_v1... | Photosynthesis.photophosphorylation.photosystem... | 0.03 | Archaeplastida | |
| AT4G19100 | PAM68 | Protein of unknown function (DUF3464) | 0.04 | Archaeplastida | |
| AT5G52780 | No alias | Protein of unknown function (DUF3464) | 0.06 | Archaeplastida | |
| Cpa|evm.model.tig00021759.13 | No alias | Photosynthesis.photophosphorylation.photosystem... | 0.02 | Archaeplastida | |
| Gb_03315 | No alias | PAM68 protein involved in PS-II assembly | 0.04 | Archaeplastida | |
| LOC_Os06g21530.1 | No alias | PAM68 protein involved in PS-II assembly | 0.06 | Archaeplastida | |
| LOC_Os10g38910.1 | No alias | PAM68 protein involved in PS-II assembly | 0.08 | Archaeplastida | |
| Pp3c21_19650V3.1 | No alias | Protein of unknown function (DUF3464) | 0.04 | Archaeplastida | |
| Solyc03g007860.1.1 | No alias | PAM68 protein involved in PS-II assembly | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006772 | thiamine metabolic process | IEP | Neighborhood |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | Neighborhood |
| CC | GO:0009521 | photosystem | IEP | Neighborhood |
| CC | GO:0009522 | photosystem I | IEP | Neighborhood |
| CC | GO:0009523 | photosystem II | IEP | Neighborhood |
| CC | GO:0009538 | photosystem I reaction center | IEP | Neighborhood |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Neighborhood |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Neighborhood |
| BP | GO:0015743 | malate transport | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Neighborhood |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Neighborhood |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042440 | pigment metabolic process | IEP | Neighborhood |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044425 | membrane part | IEP | Neighborhood |
| CC | GO:0044436 | thylakoid part | IEP | Neighborhood |
| BP | GO:0046149 | pigment catabolic process | IEP | Neighborhood |
| MF | GO:0047746 | chlorophyllase activity | IEP | Neighborhood |
| BP | GO:0051187 | cofactor catabolic process | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| CC | GO:1990204 | oxidoreductase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021855 | PAM68-like | 55 | 177 |
| No external refs found! |