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  5. GSVIVT01029112001

GSVIVT01029112001


Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase


Gene families : OG0001673 (Archaeplastida) Phylogenetic Tree(s): OG0001673_tree ,
OG_05_0001462 (LandPlants) Phylogenetic Tree(s): OG_05_0001462_tree ,
OG_06_0002272 (SeedPlants) Phylogenetic Tree(s): OG_06_0002272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029112001
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT3G21500 DXPS1 1-deoxy-D-xylulose 5-phosphate synthase 1 0.03 Archaeplastida
Gb_40956 No alias 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR033248 Transketolase_C 592 715
IPR005475 Transketolase-like_Pyr-bd 414 574
IPR005477 Dxylulose-5-P_synthase 91 376
No external refs found!