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  5. GSVIVT01029179001

GSVIVT01029179001


Description : CASP-like protein 2C1 OS=Vitis vinifera


Gene families : OG0003273 (Archaeplastida) Phylogenetic Tree(s): OG0003273_tree ,
OG_05_0002484 (LandPlants) Phylogenetic Tree(s): OG_05_0002484_tree ,
OG_06_0002124 (SeedPlants) Phylogenetic Tree(s): OG_06_0002124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029179001
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.02 Archaeplastida
AT4G25830 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
LOC_Os02g08110.1 No alias CASP-like protein 2C2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os03g10030.1 No alias CASP-like protein Os03g0196400 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_5220g0010 No alias CASP-like protein 2BC2 OS=Picea sitchensis... 0.03 Archaeplastida
MA_8167318g0010 No alias CASP-like protein 2BC1 OS=Picea sitchensis... 0.09 Archaeplastida
Smo272089 No alias CASP-like protein 2U6 OS=Selaginella moellendorffii 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 50 200
No external refs found!