GSVIVT01029219001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029219001
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00065p00077750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00202p00017170	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.08	Archaeplastida
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.02	Archaeplastida
Cre01.g009650	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	Archaeplastida
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01025307001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_36842	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os03g12950.1	No alias	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.03	Archaeplastida
LOC_Os03g56050.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os03g60430.2	No alias	transcription factor (AP2)	0.05	Archaeplastida
LOC_Os07g03250.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os07g13170.2	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_98095g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
Mp8g11450.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
Solyc02g092050.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc04g077490.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc05g051380.4.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Solyc11g010710.2.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Zm00001e005817_P003	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e032754_P003	No alias	transcription factor (AP2)	0.05	Archaeplastida
Zm00001e038652_P002	No alias	transcription factor (AP2)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	104	162
IPR001471	AP2/ERF_dom	206	256

External Links

No external refs found!

GSVIVT01029219001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation