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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component
Gene families : OG0001283 (Archaeplastida) Phylogenetic Tree(s): OG0001283_tree ,
OG_05_0001263 (LandPlants) Phylogenetic Tree(s): OG_05_0001263_tree ,
OG_06_0092579 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01029288001 | |
| Cluster | HCCA: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00107780 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
| AMTR_s00061p00187310 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
| AMTR_s00086p00164400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | Archaeplastida | |
| AT1G80750 | No alias | Ribosomal protein L30/L7 family protein | 0.07 | Archaeplastida | |
| AT2G01250 | No alias | Ribosomal protein L30/L7 family protein | 0.43 | Archaeplastida | |
| Cpa|evm.model.tig00020909.42 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.34 | Archaeplastida | |
| Cre12.g537800 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.33 | Archaeplastida | |
| Gb_20650 | No alias | component RPL7 of LSU proteome component | 0.21 | Archaeplastida | |
| LOC_Os04g51630.1 | No alias | component RPL7 of LSU proteome component | 0.25 | Archaeplastida | |
| LOC_Os08g13690.1 | No alias | component RPL7 of LSU proteome component | 0.24 | Archaeplastida | |
| LOC_Os08g42920.1 | No alias | component RPL7 of LSU proteome component | 0.03 | Archaeplastida | |
| MA_10428203g0010 | No alias | component RPL7 of LSU proteome component | 0.08 | Archaeplastida | |
| MA_109845g0010 | No alias | component RPL7 of LSU proteome component | 0.26 | Archaeplastida | |
| MA_47548g0010 | No alias | component RPL7 of LSU proteome component | 0.18 | Archaeplastida | |
| Mp3g13040.1 | No alias | component RPL7 of LSU proteome component | 0.36 | Archaeplastida | |
| Pp3c11_13640V3.1 | No alias | Ribosomal protein L30/L7 family protein | 0.03 | Archaeplastida | |
| Pp3c1_37460V3.1 | No alias | Ribosomal protein L30/L7 family protein | 0.3 | Archaeplastida | |
| Pp3c1_39470V3.1 | No alias | Ribosomal protein L30/L7 family protein | 0.35 | Archaeplastida | |
| Pp3c2_1610V3.1 | No alias | Ribosomal protein L30/L7 family protein | 0.17 | Archaeplastida | |
| Pp3c2_5820V3.1 | No alias | Ribosomal protein L30/L7 family protein | 0.29 | Archaeplastida | |
| Smo103994 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | Archaeplastida | |
| Solyc06g068400.3.1 | No alias | component RPL7 of LSU proteome component | 0.05 | Archaeplastida | |
| Solyc07g008370.4.1 | No alias | no hits & (original description: none) | 0.31 | Archaeplastida | |
| Zm00001e003731_P002 | No alias | component RPL7 of LSU proteome component | 0.05 | Archaeplastida | |
| Zm00001e007015_P002 | No alias | component RPL7 of LSU proteome component | 0.32 | Archaeplastida | |
| Zm00001e022294_P001 | No alias | component RPL7 of LSU proteome component | 0.37 | Archaeplastida | |
| Zm00001e024250_P001 | No alias | component RPL7 of LSU proteome component | 0.02 | Archaeplastida | |
| Zm00001e040072_P002 | No alias | component RPL7 of LSU proteome component | 0.18 | Archaeplastida | |
| Zm00001e041593_P001 | No alias | component RPL7 of LSU proteome component | 0.35 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006658 | phosphatidylserine metabolic process | IEP | Neighborhood |
| BP | GO:0006659 | phosphatidylserine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| No external refs found! |