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  5. GSVIVT01029299001

GSVIVT01029299001


Description : Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana


Gene families : OG0002251 (Archaeplastida) Phylogenetic Tree(s): OG0002251_tree ,
OG_05_0001483 (LandPlants) Phylogenetic Tree(s): OG_05_0001483_tree ,
OG_06_0000789 (SeedPlants) Phylogenetic Tree(s): OG_06_0000789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029299001
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021935001 No alias Probable disease resistance protein At1g61300... 0.11 Archaeplastida
GSVIVT01021948001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.12 Archaeplastida
GSVIVT01022005001 No alias No description available 0.08 Archaeplastida
GSVIVT01022044001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01022054001 No alias No description available 0.05 Archaeplastida
GSVIVT01023551001 No alias Probable disease resistance protein At4g27220... 0.08 Archaeplastida
GSVIVT01023556001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01023570001 No alias Probable disease resistance protein At4g27220... 0.06 Archaeplastida
GSVIVT01026731001 No alias No description available 0.18 Archaeplastida
GSVIVT01029297001 No alias Probable disease resistance protein At4g27220... 0.05 Archaeplastida
GSVIVT01036188001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01036191001 No alias Probable disease resistance protein At4g27220... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 160 396
IPR001611 Leu-rich_rpt 531 587
No external refs found!