GSVIVT01029940001

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED3/MED27 component

Gene families : OG0007683 (Archaeplastida) Phylogenetic Tree(s): OG0007683_tree ,
OG_05_0007765 (LandPlants) Phylogenetic Tree(s): OG_05_0007765_tree ,
OG_06_0008966 (SeedPlants) Phylogenetic Tree(s): OG_06_0008966_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01029940001
Cluster	HCCA: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
Pp3c15_4850V3.1	No alias	No annotation	0.05	Archaeplastida
Solyc01g087230.3.1	No alias	component MED3/MED27 of tail module of MEDIATOR...	0.05	Archaeplastida
Zm00001e027017_P004	No alias	component MED3/MED27 of tail module of MEDIATOR...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0017025	TBP-class protein binding	IEP	Neighborhood
BP	GO:0031123	RNA 3'-end processing	IEP	Neighborhood
BP	GO:0031124	mRNA 3'-end processing	IEP	Neighborhood
CC	GO:0031248	protein acetyltransferase complex	IEP	Neighborhood
CC	GO:0070461	SAGA-type complex	IEP	Neighborhood
CC	GO:1902493	acetyltransferase complex	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR021627	Mediator_Med27	306	414

External Links

No external refs found!

GSVIVT01029940001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation