1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01029946001

GSVIVT01029946001


Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component


Gene families : OG0003853 (Archaeplastida) Phylogenetic Tree(s): OG0003853_tree ,
OG_05_0004132 (LandPlants) Phylogenetic Tree(s): OG_05_0004132_tree ,
OG_06_0004133 (SeedPlants) Phylogenetic Tree(s): OG_06_0004133_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01029946001
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00092300 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase III-dependent... 0.02 Archaeplastida
AT2G45100 No alias Cyclin/Brf1-like TBP-binding protein 0.03 Archaeplastida
Solyc01g088720.3.1 No alias component BRF1 of TFIIIb transcription factor complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011665 BRF1_TBP-bd_dom 422 547
IPR013150 TFIIB_cyclin 193 251
IPR013150 TFIIB_cyclin 79 148
No external refs found!