1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01030085001

GSVIVT01030085001


Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01030085001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00223190 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
AMTR_s00069p00195790 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AT2G24450 FLA3 FASCICLIN-like arabinogalactan protein 3 precursor 0.03 Archaeplastida
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.05 Archaeplastida
AT3G12660 FLA14 FASCICLIN-like arabinogalactan protein 14 precursor 0.03 Archaeplastida
AT3G60900 FLA10 FASCICLIN-like arabinogalactan-protein 10 0.03 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.09 Archaeplastida
AT4G31370 FLA5 FASCICLIN-like arabinogalactan protein 5 precursor 0.03 Archaeplastida
AT5G55730 FLA1 FASCICLIN-like arabinogalactan 1 0.06 Archaeplastida
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
Gb_40985 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os01g62380.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
LOC_Os03g03600.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os08g23180.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os09g07350.1 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
MA_5116514g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g14280.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.02 Archaeplastida
Smo441324 No alias Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana 0.06 Archaeplastida
Smo55113 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Solyc01g091530.4.1 No alias classical arabinogalactan protein. fasciclin-type... 0.07 Archaeplastida
Solyc07g045440.1.1 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Solyc07g065540.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc08g006295.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc10g005960.1.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Solyc12g015690.3.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e024334_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e031109_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e033729_P002 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e034458_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 28 58
IPR000782 FAS1_domain 150 218
IPR000782 FAS1_domain 292 420
No external refs found!