Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor
Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0001060 (LandPlants) Phylogenetic Tree(s): OG_05_0001060_tree ,
OG_06_0001214 (SeedPlants) Phylogenetic Tree(s): OG_06_0001214_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01030512001 | |
Cluster | HCCA: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00122p00122810 | evm_27.TU.AmTr_v1... | Chromatin organisation.DNA methylation.canonical... | 0.02 | Archaeplastida | |
AT1G31290 | AGO3 | ARGONAUTE 3 | 0.02 | Archaeplastida | |
AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.03 | Archaeplastida | |
LOC_Os01g16870.3 | No alias | siRNA-integrating factor (AGO) | 0.03 | Archaeplastida | |
LOC_Os04g47870.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | Archaeplastida | |
LOC_Os06g51310.2 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.06 | Archaeplastida | |
LOC_Os07g09020.1 | No alias | Protein argonaute 14 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
MA_246308g0010 | No alias | Protein argonaute 7 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
MA_594g0010 | No alias | Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Mp6g20400.1 | No alias | siRNA-integrating factor (AGO) | 0.03 | Archaeplastida | |
Pp3c19_20670V3.1 | No alias | Argonaute family protein | 0.02 | Archaeplastida | |
Pp3c19_860V3.1 | No alias | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.02 | Archaeplastida | |
Smo98227 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.03 | Archaeplastida | |
Solyc01g096750.1.1 | No alias | siRNA-integrating factor (AGO) | 0.06 | Archaeplastida | |
Solyc02g069280.2.1 | No alias | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.07 | Archaeplastida | |
Solyc03g111760.3.1 | No alias | Protein argonaute 4A OS=Oryza sativa subsp. japonica... | 0.07 | Archaeplastida | |
Solyc07g049500.3.1 | No alias | siRNA-integrating factor (AGO) | 0.03 | Archaeplastida | |
Solyc09g082830.4.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.03 | Archaeplastida | |
Zm00001e002044_P002 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Zm00001e013340_P001 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.06 | Archaeplastida | |
Zm00001e017367_P001 | No alias | siRNA-integrating factor (AGO) | 0.03 | Archaeplastida | |
Zm00001e037347_P002 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0007049 | cell cycle | IEP | Neighborhood |
MF | GO:0008443 | phosphofructokinase activity | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0019200 | carbohydrate kinase activity | IEP | Neighborhood |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
BP | GO:0051321 | meiotic cell cycle | IEP | Neighborhood |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
No external refs found! |