1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00044p00139080

AMTR_s00044p00139080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.131

Description : Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana


Gene families : OG0002647 (Archaeplastida) Phylogenetic Tree(s): OG0002647_tree ,
OG_05_0002213 (LandPlants) Phylogenetic Tree(s): OG_05_0002213_tree ,
OG_06_0016778 (SeedPlants) Phylogenetic Tree(s): OG_06_0016778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00139080
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Smo416154 No alias Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 133 218
No external refs found!