GSVIVT01031670001

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IPO8 import karyopherin

Gene families : OG0004000 (Archaeplastida) Phylogenetic Tree(s): OG0004000_tree ,
OG_05_0004072 (LandPlants) Phylogenetic Tree(s): OG_05_0004072_tree ,
OG_06_0006006 (SeedPlants) Phylogenetic Tree(s): OG_06_0006006_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01031670001
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AT2G31660	SAD2, URM9	ARM repeat superfamily protein	0.05	Archaeplastida
AT3G59020	No alias	ARM repeat superfamily protein	0.08	Archaeplastida
LOC_Os02g27470.1	No alias	IPO8 nucleocytoplasmic import karyopherin	0.08	Archaeplastida
LOC_Os04g26841.1	No alias	IPO8 nucleocytoplasmic import karyopherin	0.07	Archaeplastida
MA_10434007g0010	No alias	IPO8 nucleocytoplasmic import karyopherin	0.1	Archaeplastida
Mp1g10130.1	No alias	IPO8 nucleocytoplasmic import karyopherin	0.03	Archaeplastida
Pp3c15_21650V3.1	No alias	ARM repeat superfamily protein	0.04	Archaeplastida
Pp3c9_22260V3.1	No alias	ARM repeat superfamily protein	0.04	Archaeplastida
Smo443685	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.07	Archaeplastida
Solyc09g098240.4.1	No alias	IPO8 nucleocytoplasmic import karyopherin	0.16	Archaeplastida
Zm00001e014555_P002	No alias	IPO8 nucleocytoplasmic import karyopherin	0.14	Archaeplastida
Zm00001e022550_P004	No alias	IPO8 nucleocytoplasmic import karyopherin	0.19	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008536	Ran GTPase binding	IEA	Interproscan
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
MF	GO:0017016	Ras GTPase binding	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0005047	signal recognition particle binding	IEP	Neighborhood
MF	GO:0005048	signal sequence binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Neighborhood
BP	GO:0015991	ATP hydrolysis coupled proton transport	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
BP	GO:0022406	membrane docking	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030118	clathrin coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030125	clathrin vesicle coat	IEP	Neighborhood
CC	GO:0030126	COPI vesicle coat	IEP	Neighborhood
CC	GO:0030127	COPII vesicle coat	IEP	Neighborhood
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Neighborhood
CC	GO:0030132	clathrin coat of coated pit	IEP	Neighborhood
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Neighborhood
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
MF	GO:0042277	peptide binding	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0048278	vesicle docking	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood
BP	GO:0090662	ATP hydrolysis coupled transmembrane transport	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood
BP	GO:0099131	ATP hydrolysis coupled ion transmembrane transport	IEP	Neighborhood
BP	GO:0099132	ATP hydrolysis coupled cation transmembrane transport	IEP	Neighborhood
BP	GO:0140029	exocytic process	IEP	Neighborhood
BP	GO:0140056	organelle localization by membrane tethering	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013713	Cse1	241	496
IPR001494	Importin-beta_N	24	99

External Links

No external refs found!

GSVIVT01031670001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation