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  5. GSVIVT01031892001

GSVIVT01031892001


Description : Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0001883 (LandPlants) Phylogenetic Tree(s): OG_05_0001883_tree ,
OG_06_0001731 (SeedPlants) Phylogenetic Tree(s): OG_06_0001731_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01031892001
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.09 Archaeplastida
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
Gb_18621 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_32132 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g04170.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os11g35400.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_10432761g0010 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c12_20700V3.1 No alias AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
Solyc01g079240.3.1 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g109180.4.1 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e024608_P001 No alias Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e036457_P004 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e039185_P005 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida
Zm00001e040332_P001 No alias Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 531 572
IPR000873 AMP-dep_Synth/Lig 54 521
No external refs found!