1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00044p00214770

AMTR_s00044p00214770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.229

Description : Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata


Gene families : OG0001260 (Archaeplastida) Phylogenetic Tree(s): OG0001260_tree ,
OG_05_0000793 (LandPlants) Phylogenetic Tree(s): OG_05_0000793_tree ,
OG_06_0000459 (SeedPlants) Phylogenetic Tree(s): OG_06_0000459_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00214770
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G48750 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT1G66850 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT1G73780 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT3G18280 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 Archaeplastida
LOC_Os01g49650.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g47700.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g36160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8534742g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g034390.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g119210.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc05g008895.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g069070.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 25 93
No external refs found!