1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01032405001

GSVIVT01032405001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27a component


Gene families : OG0002282 (Archaeplastida) Phylogenetic Tree(s): OG0002282_tree ,
OG_05_0002030 (LandPlants) Phylogenetic Tree(s): OG_05_0002030_tree ,
OG_06_0002836 (SeedPlants) Phylogenetic Tree(s): OG_06_0002836_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01032405001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00158350 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AMTR_s00130p00058120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AT1G23290 RPL27AB, RPL27A Ribosomal protein L18e/L15 superfamily protein 0.07 Archaeplastida
AT1G70600 No alias Ribosomal protein L18e/L15 superfamily protein 0.07 Archaeplastida
Cre02.g115200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Gb_05659 No alias component RPL27a of LSU proteome component 0.03 Archaeplastida
LOC_Os02g07890.2 No alias component RPL27a of LSU proteome component 0.03 Archaeplastida
LOC_Os03g29460.1 No alias component RPL27a of LSU proteome component 0.03 Archaeplastida
LOC_Os07g42170.1 No alias component RPL27a of LSU proteome component 0.08 Archaeplastida
MA_10436259g0020 No alias component RPL27a of LSU proteome component 0.09 Archaeplastida
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.1 Archaeplastida
Pp3c16_22430V3.1 No alias Ribosomal protein L18e/L15 superfamily protein 0.11 Archaeplastida
Pp3c20_18830V3.1 No alias Ribosomal protein L18e/L15 superfamily protein 0.03 Archaeplastida
Pp3c25_13260V3.1 No alias Ribosomal protein L18e/L15 superfamily protein 0.07 Archaeplastida
Pp3c5_26860V3.1 No alias Ribosomal protein L18e/L15 superfamily protein 0.06 Archaeplastida
Pp3c6_3470V3.1 No alias Ribosomal protein L18e/L15 superfamily protein 0.07 Archaeplastida
Pp3c8_5770V3.1 No alias Ribosomal protein L18e/L15 superfamily protein 0.11 Archaeplastida
Solyc03g112360.1.1 No alias component RPL27a of LSU proteome component 0.09 Archaeplastida
Zm00001e010753_P001 No alias component RPL27a of LSU proteome component 0.05 Archaeplastida
Zm00001e035537_P001 No alias component RPL27a of LSU proteome component 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005787 signal peptidase complex IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 46 85
No external refs found!