1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01033090001

GSVIVT01033090001


Description : Nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase dimer.small subunit


Gene families : OG0002312 (Archaeplastida) Phylogenetic Tree(s): OG0002312_tree ,
OG_05_0002638 (LandPlants) Phylogenetic Tree(s): OG_05_0002638_tree ,
OG_06_0002362 (SeedPlants) Phylogenetic Tree(s): OG_06_0002362_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033090001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT3G27060 ATTSO2, TSO2 Ferritin/ribonucleotide reductase-like family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000383.42 No alias Nucleotide metabolism.deoxynucleotide... 0.01 Archaeplastida
Cre12.g491050 No alias Nucleotide metabolism.deoxynucleotide... 0.05 Archaeplastida
Gb_17999 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.05 Archaeplastida
Gb_41675 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.17 Archaeplastida
LOC_Os06g03720.1 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.02 Archaeplastida
LOC_Os06g14620.1 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.04 Archaeplastida
MA_10430569g0010 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.08 Archaeplastida
MA_1482g0010 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.17 Archaeplastida
Mp1g09110.1 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.08 Archaeplastida
Pp3c25_1550V3.1 No alias Ferritin/ribonucleotide reductase-like family protein 0.07 Archaeplastida
Pp3c6_23160V3.1 No alias Ferritin/ribonucleotide reductase-like family protein 0.05 Archaeplastida
Smo173451 No alias Nucleotide metabolism.deoxynucleotide... 0.03 Archaeplastida
Solyc02g094160.1.1 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.05 Archaeplastida
Zm00001e007693_P001 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.1 Archaeplastida
Zm00001e030963_P001 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.04 Archaeplastida
Zm00001e036749_P001 No alias small subunit of ribonucleoside-diphosphate reductase heterodimer 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004797 thymidine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006270 DNA replication initiation IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0019136 deoxynucleoside kinase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019206 nucleoside kinase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000358 RNR_small_fam 16 111
IPR000358 RNR_small_fam 115 180
No external refs found!