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Description : Chromatin organisation.chromatin remodeling complexes.additional core components.BAF60 component
Gene families : OG0003643 (Archaeplastida) Phylogenetic Tree(s): OG0003643_tree ,
OG_05_0004669 (LandPlants) Phylogenetic Tree(s): OG_05_0004669_tree ,
OG_06_0006116 (SeedPlants) Phylogenetic Tree(s): OG_06_0006116_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01033102001 | |
| Cluster | HCCA: Cluster_189 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os04g31320.1 | No alias | component BAF60 of chromatin remodeling complex | 0.04 | Archaeplastida | |
| MA_277083g0010 | No alias | component BAF60 of chromatin remodeling complex | 0.02 | Archaeplastida | |
| Pp3c4_3810V3.1 | No alias | SWIB/MDM2 domain superfamily protein | 0.03 | Archaeplastida | |
| Solyc02g068100.3.1 | No alias | component BAF60 of chromatin remodeling complex | 0.05 | Archaeplastida | |
| Zm00001e010867_P001 | No alias | component BAF60 of chromatin remodeling complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003121 | SWIB_MDM2_domain | 261 | 332 |
| No external refs found! |