GSVIVT01033132001

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033132001
Cluster	HCCA: Cluster_208

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00179680	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00019p00179820	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	Archaeplastida
AMTR_s00019p00180640	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	Archaeplastida
AMTR_s00019p00180760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	Archaeplastida
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.01	Archaeplastida
AMTR_s00062p00055860	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.03	Archaeplastida
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.02	Archaeplastida
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.02	Archaeplastida
GSVIVT01030602001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033160001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
LOC_Os06g09050.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_141267g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_212254g0010	No alias	ligand-gated cation channel (GLR)	0.01	Archaeplastida
MA_391859g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_88153g0010	No alias	ligand-gated cation channel (GLR)	0.01	Archaeplastida
Pp3c12_5540V3.1	No alias	glutamate receptor 3.3	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001320	Iontro_rcpt	22	272
IPR001638	Solute-binding_3/MltF_N	96	241

External Links

No external refs found!

GSVIVT01033132001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation