GSVIVT01033257001

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree ,
OG_06_0000104 (SeedPlants) Phylogenetic Tree(s): OG_06_0000104_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033257001
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00068180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.05	Archaeplastida
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.04	Archaeplastida
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.06	Archaeplastida
Cre07.g354500	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
GSVIVT01009477001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01015389001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	Archaeplastida
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
GSVIVT01033781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
LOC_Os03g25120.1	No alias	transcription factor (HSF)	0.01	Archaeplastida
LOC_Os05g45410.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os09g28354.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
MA_110587g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_11527g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_41252g0020	No alias	transcription factor (HSF)	0.02	Archaeplastida
MA_5374g0010	No alias	transcription factor (HSF)	0.04	Archaeplastida
MA_8812600g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
MA_8992661g0010	No alias	transcription factor (HSF)	0.04	Archaeplastida
MA_9434330g0010	No alias	transcription factor (HSF)	0.04	Archaeplastida
Mp4g12230.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.03	Archaeplastida
Pp3c7_4270V3.1	No alias	heat shock transcription factor B4	0.02	Archaeplastida
Smo93081	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Solyc02g072060.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc04g016000.3.1	No alias	transcription factor (HSF)	0.08	Archaeplastida
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc07g055710.3.1	No alias	transcription factor (HSF)	0.06	Archaeplastida
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc12g007070.2.1	No alias	transcription factor (HSF)	0.01	Archaeplastida
Zm00001e005982_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e027464_P001	No alias	transcription factor (HSF)	0.04	Archaeplastida
Zm00001e029052_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e032174_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e034336_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e034345_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0071949	FAD binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	22	111

External Links

No external refs found!

GSVIVT01033257001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation