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  5. GSVIVT01033261001

GSVIVT01033261001


Description : Cytoskeleton.microfilament network.actin polymerisation.villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0004024 (SeedPlants) Phylogenetic Tree(s): OG_06_0004024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033261001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.07 Archaeplastida
AT4G30160 VLN4, ATVLN4 villin 4 0.12 Archaeplastida
Cpa|evm.model.tig00001366.21 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Cre12.g524400 No alias No description available 0.03 Archaeplastida
Gb_25295 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Gb_31397 No alias villin actin-crosslinking factor 0.03 Archaeplastida
LOC_Os04g51440.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
LOC_Os06g44890.1 No alias villin actin-crosslinking factor 0.05 Archaeplastida
LOC_Os08g14230.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Mp1g24640.1 No alias villin actin-crosslinking factor 0.05 Archaeplastida
Pp3c19_16000V3.1 No alias villin 2 0.03 Archaeplastida
Smo177604 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Solyc02g021420.3.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Solyc04g015830.3.1 No alias villin actin-crosslinking factor 0.06 Archaeplastida
Solyc10g080100.3.1 No alias villin actin-crosslinking factor 0.01 Archaeplastida
Zm00001e001712_P002 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e010507_P006 No alias villin actin-crosslinking factor 0.1 Archaeplastida
Zm00001e028314_P001 No alias villin actin-crosslinking factor 0.17 Archaeplastida
Zm00001e037689_P003 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e038175_P001 No alias villin actin-crosslinking factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005801 cis-Golgi network IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 636 713
IPR007123 Gelsolin-like_dom 29 111
IPR007123 Gelsolin-like_dom 532 583
IPR007123 Gelsolin-like_dom 405 483
IPR007123 Gelsolin-like_dom 265 337
IPR007123 Gelsolin-like_dom 150 217
IPR003128 Villin_headpiece 917 952
No external refs found!