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  5. GSVIVT01033265001

GSVIVT01033265001


No description available


Gene families : OG0002775 (Archaeplastida) Phylogenetic Tree(s): OG0002775_tree ,
OG_05_0012051 (LandPlants) Phylogenetic Tree(s): OG_05_0012051_tree ,
OG_06_0012119 (SeedPlants) Phylogenetic Tree(s): OG_06_0012119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033265001
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.08 Archaeplastida
Cpa|evm.model.tig00020554.42 No alias No description available 0.09 Archaeplastida
Cre19.g751197 No alias No description available 0.05 Archaeplastida
Gb_09813 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g72780.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g54110.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10433024g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g25050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c2_3190V3.1 No alias ARM repeat superfamily protein 0.05 Archaeplastida
Smo78845 No alias No description available 0.03 Archaeplastida
Solyc07g042380.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e016059_P003 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018571_P003 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 384 582
No external refs found!