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  5. GSVIVT01033559001

GSVIVT01033559001


Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0003350 (Archaeplastida) Phylogenetic Tree(s): OG0003350_tree ,
OG_05_0003850 (LandPlants) Phylogenetic Tree(s): OG_05_0003850_tree ,
OG_06_0006021 (SeedPlants) Phylogenetic Tree(s): OG_06_0006021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01033559001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00268300 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.09 Archaeplastida
AMTR_s00006p00036530 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 Archaeplastida
AMTR_s00064p00187430 evm_27.TU.AmTr_v1... GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.05 Archaeplastida
AT3G57180 BPG2 P-loop containing nucleoside triphosphate hydrolases... 0.21 Archaeplastida
Cre07.g315400 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 Archaeplastida
Gb_23819 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 Archaeplastida
LOC_Os06g30380.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.15 Archaeplastida
Mp7g03470.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.07 Archaeplastida
Pp3c18_21830V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.15 Archaeplastida
Solyc04g009300.4.1 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.1 Archaeplastida
Zm00001e024057_P001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.06 Archaeplastida
Zm00001e033957_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 373 447
No external refs found!