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  5. AMTR_s00045p00103250

AMTR_s00045p00103250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.96

Description : Solute transport.channels.VIC superfamily.voltage-gated potassium cation channel (TPK/KCO-type)


Gene families : OG0000923 (Archaeplastida) Phylogenetic Tree(s): OG0000923_tree ,
OG_05_0002004 (LandPlants) Phylogenetic Tree(s): OG_05_0002004_tree ,
OG_06_0002276 (SeedPlants) Phylogenetic Tree(s): OG_06_0002276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00103250
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT1G02510 KCO4, TPK4,... Outward rectifying potassium channel protein 0.02 Archaeplastida
LOC_Os07g01810.1 No alias voltage-gated potassium cation channel (TPK/KCO) 0.03 Archaeplastida
Pp3c8_15380V3.1 No alias Ca2+ activated outward rectifying K+ channel 5 0.03 Archaeplastida
Solyc04g014880.4.1 No alias voltage-gated potassium cation channel (TPK/KCO) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013099 K_chnl_dom 245 316
IPR013099 K_chnl_dom 121 200
No external refs found!