GSVIVT01033793001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01033793001
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00009p00148470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.04	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00021p00184450	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00034p00206140	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00095p00096190	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00107p00095070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G46768	RAP2.1	related to AP2 1	0.02	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G71450	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.05	Archaeplastida
AT5G25810	tny	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.06	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01031387001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01033416001	No alias	External stimuli response.biotic...	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_11793	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_17122	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24321	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_29220	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_29359	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Gb_41020	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g32040.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g43790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g43940.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g55380.1	No alias	transcription factor (ERF)	0.07	Archaeplastida
LOC_Os03g08470.1	No alias	Ethylene-responsive transcription factor 1 OS=Oryza...	0.04	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
LOC_Os06g09790.1	No alias	Ethylene-responsive transcription factor ERF018...	0.02	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.06	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g22730.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os07g47790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.06	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os12g39330.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
LOC_Os12g41060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10427743g0020	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10430231g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15000g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_66442g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_904750g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_9160409g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_938274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_27630V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c25_4250V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c4_23930V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c7_20200V3.1	No alias	ethylene responsive element binding factor 2	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Solyc01g057080.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc01g090300.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Solyc03g005510.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g007460.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g008350.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc12g056590.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc12g056980.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e003061_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.05	Archaeplastida
Zm00001e003707_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e015326_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e015328_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e026989_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.02	Archaeplastida
Zm00001e031783_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e032434_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.03	Archaeplastida
Zm00001e034741_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.06	Archaeplastida
Zm00001e036201_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.06	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
CC	GO:0031012	extracellular matrix	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
CC	GO:0044421	extracellular region part	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	38	88

External Links

No external refs found!

GSVIVT01033793001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation