GSVIVT01034189001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034189001
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00021p00057700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00119p00099150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.01 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT5G65590 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os01g17000.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os10g26620.1 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_83624g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c16_6460V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Pp3c5_14440V3.1 No alias cycling DOF factor 3 0.01 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Smo29617 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010022_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0017003 protein-heme linkage IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 70 126
No external refs found!